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[NTR-cxg]type IIx muscle cell #2673

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jychien opened this issue Oct 17, 2024 · 0 comments · May be fixed by #2731
Open

[NTR-cxg]type IIx muscle cell #2673

jychien opened this issue Oct 17, 2024 · 0 comments · May be fixed by #2731

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@jychien
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jychien commented Oct 17, 2024

I am currently working with the author of https://doi.org/10.1101/2024.05.15.594276. (@sebozzie)

Preferred term label
type IIx muscle cell

Synonym(s)
type 2x muscle cell, type 2x muscle fiber, type IIx muscle fiber

Definition
A fast type II muscle cell that utilize both the oxidative and glycolytic pathways for metabolism. These cells are distinguished by the expression of myosin heavy chain 1 (MYH1).

Parent cell type term
CL:0002212: type II muscle cell

Anatomical structure where the cell type is found
UBERON:0001134: skeletal muscle tissue

Additional notes or concerns

  • https://doi.org/10.1101/2024.05.15.594276: "Within the myonuclei population type IIB, IIX and IIA myonuclei were distinguishable based on the expression of Myh4, Myh1 and Myh2, respectively"
  • https://doi.org/10.1186/s13395-021-00279-0: "We provide and analyze a resource dataset based on relatively pure fibers, containing at least 80% of either MYH7 (marker of slow type 1 fibers), MYH2 (marker of fast 2A fibers), or MYH1 (marker of fast 2X fibers)."
@Caroline-99 Caroline-99 self-assigned this Oct 21, 2024
@Caroline-99 Caroline-99 added this to the Milestone 11/11/2024 milestone Oct 28, 2024
Caroline-99 added a commit that referenced this issue Nov 5, 2024
Added a New term with textual and logical defs, extended description, references and synonyms
@Caroline-99 Caroline-99 linked a pull request Nov 5, 2024 that will close this issue
aleixpuigb added a commit that referenced this issue Nov 5, 2024
Fixes #2673 NTR CxG type IIx muscle cell
@aleixpuigb aleixpuigb linked a pull request Nov 5, 2024 that will close this issue
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