Repositories list

• schematic

  Public
  Package for biomedical data model and metadata ingress management

  schemabiomedical-informaticsdata-ingress

  Python

  •

  MIT License

  •26•22•0•8•Updated Nov 6, 2024Nov 6, 2024

• Synapse-Repository-Services

  Public
  The Synapse Repository Services project is the home of the JSON REST web services for Synapse.

  Java

  •

  Apache License 2.0

  •53•36•0•4•Updated Nov 6, 2024Nov 6, 2024

• agora-data-tools

  Public
  A place for Agora's ETL and Data Testing

  Jupyter Notebook

  •

  Apache License 2.0

  •3•1•0•1•Updated Nov 6, 2024Nov 6, 2024

• snowflake

  Public
  Snowflake Administration, Transformations, and Analytics

  snowflake

  Python

  •

  Apache License 2.0

  •4•4•0•3•Updated Nov 6, 2024Nov 6, 2024

• Agora

  Public
  TypeScript

  •

  MIT License

  •12•7•0•12•Updated Nov 6, 2024Nov 6, 2024

• agora2-infra

  Public
  Jinja

  •

  Apache License 2.0

  •2•0•0•1•Updated Nov 6, 2024Nov 6, 2024

• synapsePythonClient

  Public
  Programmatic interface to Synapse services for Python

  synapsepython

  Python

  •

  Apache License 2.0

  •68•67•3•2•Updated Nov 6, 2024Nov 6, 2024

• streamlit-snowflake-template

  Public template
  Python

  •

  Apache License 2.0

  •0•2•0•0•Updated Nov 6, 2024Nov 6, 2024

• synapse-web-monorepo

  Public
  Monorepo for Synapse Web projects

  TypeScript

  •23•4•3•40•Updated Nov 6, 2024Nov 6, 2024

• Genie

  Public
  Validation and processing of GENIE files

  pythonetlgenie+ 2dpecomponc

  Python

  •

  MIT License

  •9•12•1•4•Updated Nov 5, 2024Nov 5, 2024

• recover

  Public
  A data pipeline for processing data from the RECOVER project.

  Python

  •

  Apache License 2.0

  •1•5•0•0•Updated Nov 5, 2024Nov 5, 2024

• sage-monorepo

  Public
  Where OpenChallenges, Schematic, and other Sage open source apps are built

  angularopenapischematic+ 11monorepofull-stackfairdeveloper-experiencenxagoraspecification-first+ 4

  TypeScript

  •

  Apache License 2.0

  •12•23•152•5•Updated Nov 5, 2024Nov 5, 2024

• SynapseWebClient

  Public
  The web client of the Synapse REST service core

  JavaScript

  •

  Apache License 2.0

  •37•23•1•8•Updated Nov 5, 2024Nov 5, 2024

• BridgeServer2

  Public
  Bridge Server 2.0 running on Spring Boot

  Java

  •

  Other

  •22•5•0•1•Updated Nov 5, 2024Nov 5, 2024

• data_curator-infra

  Public
  CDK-based template for deploying a containerized application to AWS

  Python

  •6•1•0•0•Updated Nov 5, 2024Nov 5, 2024

• shiny-base

  Public
  Base Docker image for Shiny applications

  Dockerfile

  •1•0•0•1•Updated Nov 5, 2024Nov 5, 2024

• agora-data-manager

  Public
  Tool to manage agora data

  Shell

  •

  Apache License 2.0

  •7•0•0•0•Updated Nov 5, 2024Nov 5, 2024

• Synapse-Migration-Utility

  Public
  Utility to migrate one Synapse stack to another

  Java

  •

  Apache License 2.0

  •4•0•0•0•Updated Nov 5, 2024Nov 5, 2024

• data_curator

  Public
  Data and metadata ingress app

  R

  •

  Apache License 2.0

  •21•10•49•1•Updated Nov 4, 2024Nov 4, 2024

• core-models

  Public
  Sage repository for data models and core models work

  Python

  •1•0•3•0•Updated Nov 4, 2024Nov 4, 2024

• Sage-Governance-Documents

  Public
  Repository of Governance documents for systems like Synapse

  Apache License 2.0

  •1•0•0•1•Updated Nov 4, 2024Nov 4, 2024

• Synapse-Stack-Builder

  Public
  Project for building a complete Synapse Stack

  Java

  •

  Apache License 2.0

  •19•5•0•1•Updated Nov 3, 2024Nov 3, 2024

• multi-services-ecs-demo

  Public
  Demo of an ECS deployment with multiple services

  Python

  •0•0•0•0•Updated Nov 2, 2024Nov 2, 2024

• data_curator_config

  Public
  Project configurations for the Data Curator App

  19•2•0•0•Updated Nov 1, 2024Nov 1, 2024

• genie-bpc-pipeline

  Public
  GENIE BPC pipeline scripts

  genie

  R

  •

  MIT License

  •1•2•0•4•Updated Nov 1, 2024Nov 1, 2024

• synapse-docker-registry

  Public
  ECS deployment for the Synapse Docker registry

  Python

  •2•0•0•0•Updated Oct 31, 2024Oct 31, 2024

• s3-synapse-sync

  Public
  Python

  •

  Apache License 2.0

  •6•3•3•1•Updated Oct 30, 2024Oct 30, 2024

• aws-htan-infra

  Public
  AWS CloudFormation templates for deploying HTAN infrastructure

  Apache License 2.0

  •4•1•1•1•Updated Oct 30, 2024Oct 30, 2024

• schematic-infra

  Public
  CDK-based template for deploying a containerized application to AWS

  Python

  •5•0•0•2•Updated Oct 25, 2024Oct 25, 2024

• service-catalog-library

  Public
  Library of service catalog templates

  scipool

  Apache License 2.0

  •9•0•0•1•Updated Oct 22, 2024Oct 22, 2024