Adding logs

[andrea-pasquale]

This PR adds some logs in order to show which protocol is being executed.
The timing of both the acquisition and the fitting are shown for each protocol.
Here is an example

Checklist:

• Reviewers confirm new code works as expected.
• Tests are passing.
• Coverage does not decrease.
• Documentation is updated.

[codecov]

Codecov Report

Merging #442 (75fc452) into main (a5cca61) will increase coverage by 0.01%.
Report is 119 commits behind head on main.
The diff coverage is 100.00%.

Additional details and impacted files

@@            Coverage Diff             @@
##             main     #442      +/-   ##
==========================================
+ Coverage   97.03%   97.05%   +0.01%     
==========================================
  Files          48       48              
  Lines        3107     3126      +19     
==========================================
+ Hits         3015     3034      +19     
  Misses         92       92              

Flag	Coverage Δ
unittests	97.05% <100.00%> (+0.01%)	⬆️

Flags with carried forward coverage won't be shown. Click here to find out more.

Files Changed	Coverage Δ
src/qibocal/auto/execute.py	98.73% <100.00%> (+0.03%)	⬆️
src/qibocal/auto/operation.py	96.09% <100.00%> (+0.59%)	⬆️
src/qibocal/auto/task.py	96.20% <100.00%> (ø)
src/qibocal/config.py	96.29% <100.00%> (ø)

[Jacfomg]

Usually the fit takes almost nothing, could we add a check to only log that time when is above a threshold (1s maybe) ?

[rodolfocarobene]

I kinda liked the "timing.json" file that we are producing for the benchmarks... Now that the the process is nicely written do you think we could have it directly in qibocal or is it useless?

[andrea-pasquale]

Usually the fit takes almost nothing, could we add a check to only log that time when is above a threshold (1s maybe) ?

Yep, I can put a threshold. Maybe 1 second is too much (?)

[andrea-pasquale]

I kinda liked the "timing.json" file that we are producing for the benchmarks... Now that the the process is nicely written do you think we could have it directly in qibocal or is it useless?

I need to see if there is a way to retrieve the information from the decorator. I feel like we don't need another json.
Perhaps we could store it somewhere else.

[andrea-pasquale]

Just to a give an update now the timings are stored in the meta.json file (formerly it was a yaml but since it should not be modified by the user I decided to converted it to json.)
I've also added a threshold as requested .
Thanks @rodolfocarobene for the review already.

[Jacfomg]

Great thanks!