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28 Open 8 Closed
28 Open 8 Closed
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Issues list

how to generate ArchR input files using snap file?
#41 opened Sep 2, 2022 by taolincj
snaptools align-paired-end fail to open bam file
#39 opened Mar 21, 2022 by mAGLAVE
1
Custom genome name
#38 opened Aug 21, 2021 by kgj1234
2
Error creating a snap file from Cellranger's fragment bed.gz file
#37 opened Aug 2, 2021 by pabloswfly
1
MACS2 error
#36 opened Mar 8, 2021 by mijhamilt
tagged release
#35 opened Jan 21, 2021 by EricDeveaud
is GRCh38 reference compatible with “snaptools align-paired-end”?
#34 opened Nov 15, 2020 by shhxiao19
Bug in isBedQuerynameSorted()
#33 opened Oct 9, 2020 by kridsadakorn
The sdev of smat slot is NAN (DiffusionMaps)
#32 opened Oct 8, 2020 by ChangliangWang
Trouble running runKNN()
#28 opened Apr 6, 2020 by suminwei2772
Error in runJaccard
#27 opened Mar 5, 2020 by yqshao17
Error running snap-add-pmat
#25 opened Feb 4, 2020 by drbecavin
1
Dump Read Slow
#24 opened Jan 26, 2020 by suragnair
Number of barcodes doesn't match with cellranger output.
#23 opened Jan 10, 2020 by NKleinenkuhnen
1
memory issue with creating bam file with snaptools align paired reads
#21 opened Dec 26, 2019 by danielgchen
1
Possible issue with uint8 in bmat
#19 opened Sep 26, 2019 by dawe
3
Documentation for handling snap files
#18 opened Sep 13, 2019 by dawe
creating snap files from another processing pipeline
#16 opened Sep 10, 2019 by dawe
3
Error running snaptools snap-pre
#15 opened Sep 8, 2019 by Austin-s-h
3
Annotation of additional data to single barcodes/cells
#14 opened Jul 19, 2019 by cschmidl
1
Mouse and Human Mixed Data Experiment - Alignment Reference
#13 opened Jun 3, 2019 by znavidi
4
Barcode Sequencing Errors
#12 opened May 23, 2019 by Austin-s-h
2
Cyclic dependency for make bmat
#7 opened Apr 28, 2019 by Zepeng-Mu
3
Out of memory - snap object
#6 opened Apr 26, 2019 by aalvarezf
9
snap-add-gmat error
#5 opened Apr 11, 2019 by plbngl
6
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