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techdev-project.yml
36 workflow runs
36 workflow runs

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Clean up unused containers Add issues/PRs to the TechDev project #36: Pull request #127 opened by kelly-sovacool
November 5, 2024 18:43 12s cleanup
cleanup
November 5, 2024 18:43 12s
clean up unused containers Add issues/PRs to the TechDev project #35: Issue #125 opened by kelly-sovacool
November 4, 2024 21:00 16s
November 4, 2024 21:00 16s
fix: correct xavier base path for cache subcommand Add issues/PRs to the TechDev project #34: Pull request #124 opened by kelly-sovacool
November 4, 2024 20:49 11s fix-cache
fix-cache
November 4, 2024 20:49 11s
fix: upgrade multiqc docker with PYTHONPATH unset Add issues/PRs to the TechDev project #33: Pull request #123 opened by kelly-sovacool
November 1, 2024 18:08 12s iss-122
iss-122
November 1, 2024 18:08 12s
Error in MultiQC rule Add issues/PRs to the TechDev project #32: Issue #122 opened by samarth8392
November 1, 2024 17:30 11s
November 1, 2024 17:30 11s
Hotfix: Bug in assess_signficance.R script Add issues/PRs to the TechDev project #31: Pull request #121 opened by samarth8392
October 3, 2024 20:01 14s iss-120
iss-120
October 3, 2024 20:01 14s
Error in rule freec_exome_somatic Add issues/PRs to the TechDev project #30: Issue #120 opened by samarth8392
October 3, 2024 19:50 13s
October 3, 2024 19:50 13s
Fix docker tag name Add issues/PRs to the TechDev project #29: Pull request #118 opened by samarth8392
October 2, 2024 16:08 13s fix-docker
fix-docker
October 2, 2024 16:08 13s
fix: update multiqc docker to 1.15 Add issues/PRs to the TechDev project #28: Pull request #117 opened by kelly-sovacool
October 1, 2024 15:08 14s multiqc-docker
multiqc-docker
October 1, 2024 15:08 14s
Update wes_base docker to v1.1.0 Add issues/PRs to the TechDev project #27: Pull request #116 opened by samarth8392
September 26, 2024 19:17 11s update-docker
update-docker
September 26, 2024 19:17 11s
ci: set up action to build docker images automagically Add issues/PRs to the TechDev project #26: Pull request #115 opened by kelly-sovacool
September 26, 2024 19:14 12s update-docker-action
update-docker-action
September 26, 2024 19:14 12s
add debug subcommand for devs Add issues/PRs to the TechDev project #25: Pull request #114 opened by kelly-sovacool
September 19, 2024 17:16 13s debug-base
debug-base
September 19, 2024 17:16 13s
chore: specify ccbr_tools version v0.1.0 Add issues/PRs to the TechDev project #24: Pull request #112 opened by kelly-sovacool
August 27, 2024 17:00 17s tools-version
tools-version
August 27, 2024 17:00 17s
refactor: update bin/redirect from RENEE Add issues/PRs to the TechDev project #23: Pull request #111 opened by kelly-sovacool
August 20, 2024 18:50 13s redirect
redirect
August 20, 2024 18:50 13s
fix: use spooker available in ccbrpipeliner module Add issues/PRs to the TechDev project #22: Pull request #110 opened by kelly-sovacool
August 19, 2024 16:48 11s use-module-spooker
use-module-spooker
August 19, 2024 16:48 11s
Bug fix related to correct default targets file in GUI Add issues/PRs to the TechDev project #21: Pull request #109 opened by samarth8392
August 15, 2024 19:21 14s hotfix-gui-targ
hotfix-gui-targ
August 15, 2024 19:21 14s
bug: Default targets file is always for hg38 when running GUI Add issues/PRs to the TechDev project #20: Issue #108 opened by samarth8392
August 15, 2024 19:14 10s
August 15, 2024 19:14 10s
Uploaded new test dataset for github workflow Add issues/PRs to the TechDev project #19: Pull request #107 opened by samarth8392
August 15, 2024 17:44 13s test-data
test-data
August 15, 2024 17:44 13s
deprecation warning - invalid escape sequence Add issues/PRs to the TechDev project #18: Issue #106 opened by kelly-sovacool
August 13, 2024 21:09 11s
August 13, 2024 21:09 11s
Use shared helper functions from ccbr_tools Add issues/PRs to the TechDev project #17: Pull request #105 opened by kelly-sovacool
August 13, 2024 19:02 17s use-tools
use-tools
August 13, 2024 19:02 17s
fix: increase mem for some rules; gatk contamination not run as localrule Add issues/PRs to the TechDev project #16: Pull request #104 opened by samarth8392
August 13, 2024 18:10 14s iss-89
iss-89
August 13, 2024 18:10 14s
merge default --target feature Add issues/PRs to the TechDev project #15: Pull request #103 opened by samarth8392
August 12, 2024 19:09 11s main
main
August 12, 2024 19:09 11s
Set default exome targets file based on genome Add issues/PRs to the TechDev project #14: Pull request #102 opened by kelly-sovacool
August 12, 2024 16:12 11s iss-100
iss-100
August 12, 2024 16:12 11s
get refactor gui changes into this branch Add issues/PRs to the TechDev project #13: Pull request #101 opened by samarth8392
August 12, 2024 15:45 16s main
main
August 12, 2024 15:45 16s
set default targets file based on genome if --targets not provided Add issues/PRs to the TechDev project #12: Issue #100 opened by kelly-sovacool
August 9, 2024 16:26 14s
August 9, 2024 16:26 14s