Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Update bioconda-utils to 3.3.2 #51044

Merged
merged 2 commits into from
Sep 30, 2024
Merged

Update bioconda-utils to 3.3.2 #51044

merged 2 commits into from
Sep 30, 2024

Conversation

BiocondaBot
Copy link
Collaborator

@BiocondaBot BiocondaBot commented Sep 30, 2024

Update bioconda-utils: 3.3.13.3.2

install with bioconda Conda

Info Link or Description
Recipe recipes/bioconda-utils (click to view/edit other files)
Summary Utilities for building and managing bioconda recipes.
Home https://bioconda.github.io/contributor/build-system.html
Releases https://github.com/bioconda/bioconda-utils/tags
Author @bioconda

This pull request was automatically generated (see docs).

@BiocondaBot BiocondaBot added autobump Automatic Version Update new version labels Sep 30, 2024
Copy link

coderabbitai bot commented Sep 30, 2024

📝 Walkthrough
📝 Walkthrough

Walkthrough

The pull request updates the bioconda-utils package version from 3.3.1 to 3.3.2. It includes an updated SHA256 checksum to correspond with the new version and modifies the source URL to point to the latest tarball. The build configuration, requirements, and test sections remain unchanged, preserving the package's metadata.

Changes

Files Change Summary
recipes/bioconda-utils/meta.yaml - Version updated from 3.3.1 to 3.3.2
- SHA256 updated from db6b99456a334b958ba61fcfc6e717e5f22848342f99fecb1f6f2b0113165054 to 6c6dcac689a2fb0f8142546aa9021bfd620fe484e724e4844a2d2e55c337747c
- Source URL modified for new version's tarball
- Requirement for Python updated to <3.12

Possibly related PRs

  • Update snakeobjects to 3.1.4 #51019: Updates the snakeobjects package to version 3.1.4 and includes a restriction on the Python version to <3.12, which aligns with the main PR's requirement for Python to be less than version 3.12.
  • Update architeuthis to 0.3.1 #50970: Updates the architeuthis package to version 0.3.1, which also involves changing the version number and SHA256 checksum, similar to the changes made in the main PR.
  • 2024.4 #50977: Updates the biobb_structure_checking package to version 3.13.5, which includes a version change and SHA256 checksum update, paralleling the updates in the main PR.
  • Update peaks2utr to 1.3.2 #50979: Updates the peaks2utr package to version 1.3.2, involving a version increment and SHA256 checksum change, similar to the main PR's modifications.
  • Update msisensor-pro to 1.3.0 #51003: Updates the msisensor-pro package to version 1.3.0, which includes a version change and SHA256 checksum update, akin to the changes in the main PR.
  • Update giatools to 0.3 #51004: Updates the giatools package to version 0.3, which involves a version increment and SHA256 checksum update, similar to the main PR's changes.
  • Update giatools to 0.3.1 #51007: Updates the giatools package to version 0.3.1, which also involves a version change and SHA256 checksum update, paralleling the updates in the main PR.
  • Update gempipe to 1.35.3 #51008: Updates the gempipe package to version 1.35.3, which includes a version change and SHA256 checksum update, similar to the main PR's modifications.
  • Update baltic to 0.3.0 #51010: Updates the baltic package to version 0.3.0, which involves a version increment and SHA256 checksum change, akin to the changes in the main PR.
  • Update pybiolib to 1.2.181 #51015: Updates the pybiolib package to version 1.2.181, which includes a version change and SHA256 checksum update, similar to the main PR's modifications.
  • Update quatradis to 1.3.1 #51027: Updates the quatradis package to version 1.3.1, which involves a version increment and SHA256 checksum change, paralleling the updates in the main PR.
  • Update slow5tools to 1.3.0 #51048: Updates the slow5tools package to version 1.3.0, which includes a version change and SHA256 checksum update, similar to the main PR's modifications.

📜 Recent review details

Configuration used: CodeRabbit UI
Review profile: CHILL

📥 Commits

Files that changed from the base of the PR and between 1757dbb and c2c3b6b.

📒 Files selected for processing (1)
  • recipes/bioconda-utils/meta.yaml (2 hunks)
🚧 Files skipped from review as they are similar to previous changes (1)
  • recipes/bioconda-utils/meta.yaml

Thank you for using CodeRabbit. We offer it for free to the OSS community and would appreciate your support in helping us grow. If you find it useful, would you consider giving us a shout-out on your favorite social media?

❤️ Share
🪧 Tips

Chat

There are 3 ways to chat with CodeRabbit:

  • Review comments: Directly reply to a review comment made by CodeRabbit. Example:
    • I pushed a fix in commit <commit_id>, please review it.
    • Generate unit testing code for this file.
    • Open a follow-up GitHub issue for this discussion.
  • Files and specific lines of code (under the "Files changed" tab): Tag @coderabbitai in a new review comment at the desired location with your query. Examples:
    • @coderabbitai generate unit testing code for this file.
    • @coderabbitai modularize this function.
  • PR comments: Tag @coderabbitai in a new PR comment to ask questions about the PR branch. For the best results, please provide a very specific query, as very limited context is provided in this mode. Examples:
    • @coderabbitai gather interesting stats about this repository and render them as a table. Additionally, render a pie chart showing the language distribution in the codebase.
    • @coderabbitai read src/utils.ts and generate unit testing code.
    • @coderabbitai read the files in the src/scheduler package and generate a class diagram using mermaid and a README in the markdown format.
    • @coderabbitai help me debug CodeRabbit configuration file.

Note: Be mindful of the bot's finite context window. It's strongly recommended to break down tasks such as reading entire modules into smaller chunks. For a focused discussion, use review comments to chat about specific files and their changes, instead of using the PR comments.

CodeRabbit Commands (Invoked using PR comments)

  • @coderabbitai pause to pause the reviews on a PR.
  • @coderabbitai resume to resume the paused reviews.
  • @coderabbitai review to trigger an incremental review. This is useful when automatic reviews are disabled for the repository.
  • @coderabbitai full review to do a full review from scratch and review all the files again.
  • @coderabbitai summary to regenerate the summary of the PR.
  • @coderabbitai resolve resolve all the CodeRabbit review comments.
  • @coderabbitai configuration to show the current CodeRabbit configuration for the repository.
  • @coderabbitai help to get help.

Other keywords and placeholders

  • Add @coderabbitai ignore anywhere in the PR description to prevent this PR from being reviewed.
  • Add @coderabbitai summary to generate the high-level summary at a specific location in the PR description.
  • Add @coderabbitai anywhere in the PR title to generate the title automatically.

CodeRabbit Configuration File (.coderabbit.yaml)

  • You can programmatically configure CodeRabbit by adding a .coderabbit.yaml file to the root of your repository.
  • Please see the configuration documentation for more information.
  • If your editor has YAML language server enabled, you can add the path at the top of this file to enable auto-completion and validation: # yaml-language-server: $schema=https://coderabbit.ai/integrations/schema.v2.json

Documentation and Community

  • Visit our Documentation for detailed information on how to use CodeRabbit.
  • Join our Discord Community to get help, request features, and share feedback.
  • Follow us on X/Twitter for updates and announcements.

@mencian
Copy link
Contributor

mencian commented Sep 30, 2024

May need to pin python to <3.12

@mencian mencian merged commit d8e872a into master Sep 30, 2024
7 checks passed
@mencian mencian deleted the bump/bioconda_utils branch September 30, 2024 16:10
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
autobump Automatic Version Update new version
Projects
None yet
Development

Successfully merging this pull request may close these issues.

3 participants