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[ENH] State of the schema sprint #1075
Commits on Feb 24, 2022
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SCHEMA: Encode first two MR metadata tables as "sidecars.yml" (#1016)
Co-authored-by: Christopher J. Markiewicz <[email protected]>
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Commits on Mar 3, 2022
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Commits on Mar 17, 2022
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Merge pull request #1017 from tsalo/tsalo-tables
[SCHEMA] Define YAML tables for MRI common metadata fields and anatomy data
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Commits on Apr 7, 2022
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[SCHEMA] Define YAML tables for DWI/ASL/(i)EEG/micr/beh metadata (#1029)
* Draft ASL and DWI metadata table rules. * Add description addendum. * Define metadata for the behavioral modality. * Whoops, separate beh and continuous data. * Add EEG. * Add iEEG. * Fix. * Add microscopy. * Split up the existing sidecars file. * Fix issues. * Update micr.yaml * Update entities.yaml
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Squashed commit of the following: commit ee5ff05 Author: anthony galassi <[email protected]> Date: Thu Apr 7 15:48:02 2022 -0400 moved pet stuff to src/schema/rules/sidecars/pet.yaml commit d00e683 Author: Anthony Galassi <[email protected]> Date: Fri Mar 18 09:40:55 2022 -0400 Update src/schema/rules/sidecars.yml commit 928eea2 Author: Anthony Galassi <[email protected]> Date: Thu Mar 17 15:42:10 2022 -0400 Add backticks Added backticks commit 50b0ae0 Author: anthony galassi <[email protected]> Date: Tue Mar 15 12:34:42 2022 -0400 fixed level addendum's, removed quotes for selector in PETMRISequenceSpecifics to make linter happy commit 4a177c0 Author: anthony galassi <[email protected]> Date: Mon Mar 14 15:59:54 2022 -0400 fixed n - 1 yaml errors, 1 remaining commit 6e40318 Author: Anthony Galassi <[email protected]> Date: Mon Mar 14 15:49:29 2022 -0400 Update src/schema/rules/sidecars.yml change addendum -> level_addendum per commit suggestion. Co-authored-by: Taylor Salo <[email protected]> commit a4fb377 Merge: 41bc816 c5f89c6 Author: Anthony Galassi <[email protected]> Date: Mon Mar 14 15:17:00 2022 -0400 Merge branch 'schema/sidecar_validation' into bendhouseart-tables commit 41bc816 Author: anthony galassi <[email protected]> Date: Thu Mar 10 15:49:58 2022 -0500 fixed yaml formatting
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Commits on Apr 8, 2022
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[SCHEMA] Add MEG, func, and fmap metadata tables (#1054)
* Add MEG. * Add fmap file. * Add func file. * Fix a couple of things. * Update func.yaml
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Commits on Apr 12, 2022
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started adding special_errors corresponding to columne 'Reason' Valid…
…ator Issues google sheet
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Commits on Apr 13, 2022
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Update src/schema/rules/tabular_data/eeg.yaml
Co-authored-by: Taylor Salo <[email protected]>
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Merge pull request #1061 from effigies/schema/tsv-task
SCHEMA: Specify column requirement levels for several tabular files
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Commits on Apr 14, 2022
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Merge pull request #1066 from tsalo/schema-sprint-taylor-2
Replace `addendum` with `description_addendum`
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Merge pull request #1070 from rwblair/schema/pet_tsv
[SCHEMA] Define blood.tsv columns
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Update src/schema/rules/sidecars/asl_validation.yaml
Co-authored-by: Chris Markiewicz <[email protected]>
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[SCHEMA] Add datatypes field to datatype rule files (#1012)
* Add datatypes field to datatype rule files. * Update src/schema/rules/datatypes/meg.yaml Co-authored-by: Chris Markiewicz <[email protected]> Co-authored-by: Chris Markiewicz <[email protected]>
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Merge branch 'schema-sprint' of github.com:bids-standard/bids-specifi…
…cation into schema/common_derivatives
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Merge pull request #1063 from bendhouseart/schema-sprint
[SCHEMA] Correlating existing validator issues to schema entries
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Merge pull request #1074 from effigies/name-tables
SCHEMA: Convert datatype lists to objects
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Merge branch 'schema-sprint' of github.com:bids-standard/bids-specifi…
…cation into schema/common_derivatives
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Merge branch 'schema/common_derivatives' of github.com:rwblair/bids-s…
…pecification into schema/common_derivatives
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Commits on Apr 15, 2022
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Apply suggestions from code review
Co-authored-by: Chris Markiewicz <[email protected]>
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Merge branch 'schema-sprint-taylor' of https://github.com/tsalo/bids-…
…specification into schema-sprint-taylor
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Merge pull request #1069 from effigies/schema/context
SCHEMA: Create context schema in meta/
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Merge pull request #1060 from tsalo/schema-sprint-taylor
Start drafting validation rules for ASL data
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generate common_derivatives datatypes from all other existing datatyp…
…es. Add anatomical volumetric, mask and segmentation derivatives
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Update src/schema/rules/datatypes/derivatives.yaml
Co-authored-by: Taylor Salo <[email protected]>
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Merge branch 'schema-sprint' of github.com:bids-standard/bids-specifi…
…cation into schema/common_derivatives
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Conform schema/rules for sidecars and tabular_data
Did my best to conform all these rules to the sprint standard decisions.
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Merge pull request #1078 from ericearl/fix/conform-schema
[SCHEMA] Conform the schema/rules files consistently
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Merge branch 'schema-sprint' of github.com:bids-standard/bids-specifi…
…cation into schema/common_derivatives
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add missing periods and use full entity name in dataype common imagin…
…g derivatives add missing comma in tabular common_derivatives
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Commits on Apr 16, 2022
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Merge pull request #1064 from effigies/schema/dataset_description
[RTM] SCHEMA: Encode requirement levels for dataset_description and genetic_info
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Merge branch 'schema-sprint' of github.com:bids-standard/bids-specifi…
…cation into schema/common_derivatives
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Commits on Apr 21, 2022
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Merge pull request #1072 from rwblair/schema/common_derivatives
[SCHEMA] Define common derivatives rules
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Commits on Apr 25, 2022
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Merge pull request #1094 from rwblair/schema/convert-checks-to-js
SCHEMA convert selectors and checks to javascript
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