v0.0.1

jmpost 0.0.1

• Initial Release

What's Changed

• New history by @gowerc in #205
• Fix issue with multiple chains by @gowerc in #207
• Update Survival Plots by @gowerc in #208
• Re-enable lintr CICD checking by @gowerc in #222
• Add ability to extract raw samples by @gowerc in #221
• Major Documentation Update by @gowerc in #223
• re-enabled lintr by @gowerc in #225
• Align Longitudinal Plots API by @gowerc in #228
• Remove Global Variable by @gowerc in #229
• Fix cicd failures by @gowerc in #231
• Enable Blank data objects by @gowerc in #232
• Prior parameters supplied as data by @gowerc in #234
• Print methods by @gowerc in #235
• Print method for data objects by @gowerc in #236
• Feature/print quantities by @gowerc in #237
• Implements the Brier Score by @gowerc in #241
• Fix R code in Readme by @gowerc in #244
• Improve Stan Parser by @gowerc in #246
• Add Stan + jmpost examples by @gowerc in #251
• Improve the GSF model implementation by @gowerc in #249
• Add missing prior distributions by @gowerc in #252
• Different initial values for each mcmc chain by @gowerc in #254
• Model guidance by @gowerc in #256
• Change LICENSE.md to plain text LICENSE by @cicdguy in #260
• Rework link functions by @gowerc in #259
• More examples of AIC / BIC / loo by @gowerc in #262
• Add Stein-Fojo Model by @gowerc in #265
• Reduce file length to appease R CMD CHECK by @gowerc in #267
• Added RdPack for references by @gowerc in #271
• Added user option to adjust GQ function by @gowerc in #272
• Address CRAN check warnings by @gowerc in #270
• Changed parameterisation of Loglogistic model by @gowerc in #275
• Add "exe" extension to windows programs by @gowerc in #276
• Simulation function supports multiple studies by @gowerc in #278
• Support Negative Time / Re-work Simulation function by @gowerc in #282
• Added coercion function by @gowerc in #290
• Re-factored the stan code for longitudinal generated quantities by @gowerc in #289
• Add helpful instructions to direct user if cmdstanr is not installed by @gowerc in #292
• Enable Left-Censoring for Random Slope Model by @gowerc in #291
• Document need for manual IVs for constrained parameters by @gowerc in #295
• Add documentation for missing survival distributions by @gowerc in #297
• Added data object documentation by @gowerc in #298
• Rework of Generated Quantities by @gowerc in #294
• Added GridEven and GridManual by @gowerc in #303
• Plot Examples by @gowerc in #304
• Fix generating quantities not using correct max value by @gowerc in #306
• Fix Example code by @gowerc in #307
• Harmonise link methods by @gowerc in #308
• Population summary for longitudinal model by @gowerc in #309
• added missing assertion by @gowerc in #311
• Refactor of QuantityGenerators by @gowerc in #312
• Support for Survival Predictions by @gowerc in #313
• Fix SF model not compiling by @gowerc in #314
• Added Survival Documentation by @gowerc in #315
• Enabled GridPrediction() to work with survival only models by @gowerc in #321
• Include documentation for generated quantity data objects by @gowerc in #319
• Warnings for StanModules + cleanup by @gowerc in #326
• Implements growth link function by @gowerc in #330
• Document interfaces for custom longitudinal models by @gowerc in #318
• Add documentation for extending the simulation functions by @gowerc in #328
• Convert "patient" -> "subject" by @gowerc in #331
• Change the URL checker to lychee by @cicdguy in #337
• Fix failing CRON unit tests by @gowerc in #336
• removed legacy option by @gowerc in #335
• Update cmdstandr URL by @gowerc in #339
• Include cmdstan url to description file by @gowerc in #340
• updated priors for regression coeficients by @gowerc in #344
• Remove model cache by @gowerc in #343
• Implement GridEvent() by @gowerc in #353
• Harmonise Simulation and formula parameter values by @gowerc in #354
• Covert growth link to be on log scale by @gowerc in #357
• Update Snapshot tests by @gowerc in #360
• Fix number of chains print method by @gowerc in #362
• Add toggle for Graph Snapshot Testing by @gowerc in #361
• Rename lt0 -> gte0 by @gowerc in #363
• Stop deletion of snapshot files by @gowerc in #366
• Defer inclusion of generated quantity code by @gowerc in #364
• Claret Bruno Model by @gowerc in #350
• Fix SF Quantities by @gowerc in #370
• Logit-Normal parameterisation for GSF Phi by @gowerc in #375
• Support initial values for constrained parameters by @gowerc in #372
• Flow diagram by @gowerc in #369
• Fix prior_shrinkage documentation by @gowerc in #378
• Change default landing page for tags by @cicdguy in #379
• Resolve CICD errors by @gowerc in #381
• First Version by @gowerc in #385

Full Changelog: https://github.com/Genentech/jmpost/commits/v0.0.1